Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs61985464 | chr14:59860716 | T/C | 0.000166 | 481 | 16.37 | 15 | 5.45 | KM Plot |
| THCA | rs61986025 | chr14:59700366 | C/T | 2.57E-8 | 486 | 16.07 | 14.9 | 5.1 | KM Plot |
| THCA | rs61986027 | chr14:59705458 | A/G | 2.57E-8 | 486 | 16.07 | 14.9 | 5.1 | KM Plot |
| THCA | rs61986028 | chr14:59713871 | C/T | 1.54E-8 | 486 | 16.3 | 14.7 | 5.45 | KM Plot |
| THCA | rs61986029 | chr14:59724880 | C/G | 1.62E-8 | 487 | 16.33 | 13.5 | 5.45 | KM Plot |
| THCA | rs61986030 | chr14:59728098 | C/T | 1.62E-8 | 487 | 16.33 | 13.5 | 5.45 | KM Plot |
| THCA | rs61986031 | chr14:59728168 | C/T | 1.62E-8 | 487 | 16.33 | 13.5 | 5.45 | KM Plot |
| THCA | rs61986048 | chr14:59737176 | G/A | 1.4E-8 | 490 | 16.4 | 12.7 | 5.45 | KM Plot |
| THCA | rs61986049 | chr14:59739068 | G/A | 1.41E-8 | 489 | 16.4 | 12.62 | 5.45 | KM Plot |
| THCA | rs61986052 | chr14:59745427 | G/C | 1.39E-8 | 490 | 16.38 | 12.62 | 5.45 | KM Plot |
| THCA | rs61986054 | chr14:59749187 | T/A | 1.4E-8 | 488 | 16.38 | 12.62 | 5.45 | KM Plot |
| THCA | rs61986055 | chr14:59749226 | T/C | 1.4E-8 | 488 | 16.38 | 12.62 | 5.45 | KM Plot |
| THCA | rs61986056 | chr14:59750695 | G/A | 1.4E-8 | 488 | 16.38 | 12.62 | 5.45 | KM Plot |
| THCA | rs61986057 | chr14:59752957 | C/T | 1.52E-7 | 483 | 15.93 | 16.23 | 5.45 | KM Plot |
| THCA | rs61986058 | chr14:59758165 | A/C | 1.4E-8 | 488 | 16.38 | 12.62 | 5.45 | KM Plot |